When my collaborators and I develop new statistical methodology, we make the code implementing the methodology publicly available. So nearly all methodological papers listed on the Research page have a link to accompanying software. Most of these software packages are not designed to be super user friendly, but rather are there for reproducibility purposes.

User-oriented software:

• phylodyn: R package for estimating effective population size changes from gene genealogies. Available on CRAN and github.

Last modified: May, 2017